Difference between revisions of "RXN-15115"

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(Created page with "Category:reaction == Reaction RXN-18303 == * direction: ** left-to-right * common-name: ** galactosylceramide sulfotransferase ** digalactosylceramide sulfotransferase * e...")
(Created page with "Category:reaction == Reaction RXN-22198 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-24185[c] '''=>''' 1.0 CPD-22095[c] == Gene(s) associated...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-18303 ==
+
== Reaction RXN-22198 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** galactosylceramide sulfotransferase
 
** digalactosylceramide sulfotransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.8.2.11 ec-2.8.2.11]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Digalactosylceramides]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Digalactosylceramide-sulfate]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[CPD-24185]][c] '''=>''' 1.0 [[CPD-22095]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ02661]]
* Gene: [[SJ18184]]
+
** Category: [[manual]]
** Category: [[annotation]]
+
*** Source: [[reactions_creator_sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: gallo2020
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ11352]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05173]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ13394]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20074]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ13400]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ13393]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ11525]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ09270]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21441]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14141]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05785]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7840]], gala-series glycosphingolipids biosynthesis:
+
* [[PWY-8238]]:
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_creator_sjap]]; tool: [[curation]]; comment: gallo2020
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=digalactosylceramide sulfotransferase|galactosylceramide sulfotransferase}}
+
{{#set: nb gene associated=1}}
{{#set: ec-number=ec-2.8.2.11}}
 
{{#set: nb gene associated=12}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=gallo2020}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=reactions_creator_sjap}}

Revision as of 08:33, 15 March 2021

Reaction RXN-22198

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8238:
    • 2 reactions found over n.a reactions in the full pathway

Reconstruction information

External links