Difference between revisions of "RXN-15122"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE-AMMONIA-LYASE-RXN HISTIDINE-AMMONIA-LYASE-RXN] == * direction: ** left-to-right * ec-numb...")
 
(Created page with "Category:reaction == Reaction RXN-15122 == * direction: ** reversible * common-name: ** threonine deaminase == Reaction formula == * 1 THR[c] '''<=>''' 1 CPD-15056...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE-AMMONIA-LYASE-RXN HISTIDINE-AMMONIA-LYASE-RXN] ==
+
== Reaction RXN-15122 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/4.3.1.3 ec-4.3.1.3]
+
** threonine deaminase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HIS]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[UROCANATE]][c]
+
* 1 [[THR]][c] '''<=>''' 1 [[CPD-15056]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07221]]
+
* Gene: [[SJ08066]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10955]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISDEG-PWY]], L-histidine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=HISDEG-PWY HISDEG-PWY]
+
* [[PWY-5437]], L-threonine degradation I:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5028]], L-histidine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5028 PWY-5028]
+
* [[PWY-5826]], hypoglycin biosynthesis:
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[HISHP-PWY]], L-histidine degradation VI: [http://metacyc.org/META/NEW-IMAGE?object=HISHP-PWY HISHP-PWY]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR119155
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21233 21233]
+
{{#set: direction=reversible}}
−
* LIGAND-RXN:
+
{{#set: common-name=threonine deaminase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01168 R01168]
+
{{#set: nb gene associated=2}}
−
* UNIPROT:
+
{{#set: nb pathway associated=3}}
−
** [http://www.uniprot.org/uniprot/P21310 P21310]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P21213 P21213]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P35492 P35492]
 
−
** [http://www.uniprot.org/uniprot/Q9RZ06 Q9RZ06]
 
−
** [http://www.uniprot.org/uniprot/P24221 P24221]
 
−
** [http://www.uniprot.org/uniprot/P42357 P42357]
 
−
** [http://www.uniprot.org/uniprot/Q20502 Q20502]
 
−
** [http://www.uniprot.org/uniprot/P10944 P10944]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-4.3.1.3}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-15122

  • direction:
    • reversible
  • common-name:
    • threonine deaminase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5437, L-threonine degradation I:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5826, hypoglycin biosynthesis:
    • 2 reactions found over 14 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine):
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119155





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-15122&oldid=141522"