Difference between revisions of "RXN-15129"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-11...")
 
(Created page with "Category:reaction == Reaction RXN-15129 == * direction: ** left-to-right * common-name: ** cystathionine gamma-lyase ** l-cysteine desulfhydrase == Reaction formula == * 1...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] ==
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== Reaction RXN-15129 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
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** left-to-right
** [http://metacyc.org/META/NEW-IMAGE?object=tax-3035 tax-3035]
 
** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224]
 
** [http://metacyc.org/META/NEW-IMAGE?object=tax-201174 tax-201174]
 
 
* common-name:
 
* common-name:
** tca cycle iv (2-oxoglutarate decarboxylase)
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** cystathionine gamma-lyase
== Reaction(s) found ==
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** l-cysteine desulfhydrase
* [[ACONITATEDEHYDR-RXN]]
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== Reaction formula ==
* [[ACONITATEHYDR-RXN]]
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* 1 [[CYS]][c] '''=>''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[HS]][c]
* [[CITSYN-RXN]]
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== Gene(s) associated with this reaction  ==
* [[FUMHYDR-RXN]]
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* Gene: [[SJ20026]]
* [[ISOCIT-CLEAV-RXN]]
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** Category: [[annotation]]
* [[ISOCITDEH-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* [[MALATE-DEH-RXN]]
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** Category: [[orthology]]
* [[MALSYN-RXN]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* [[RXN-14971]]
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* Gene: [[SJ05357]]
* [[SUCCSEMIALDDEHYDROG-RXN]]
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** Category: [[annotation]]
== Reaction(s) not found ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7774 RXN-7774]
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* Gene: [[SJ05358]]
{{#set: taxonomic-range=tax-3035|tax-1117|tax-201174|tax-1224}}
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** Category: [[annotation]]
{{#set: common-name=tca cycle iv (2-oxoglutarate decarboxylase)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
{{#set: nb reaction found=10}}
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== Pathway(s) ==
{{#set: completion rate=0.91}}
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* [[LCYSDEG-PWY]], L-cysteine degradation II:
{{#set: nb total reaction=11}}
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR119157
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43037 43037]
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{{#set: direction=left-to-right}}
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{{#set: common-name=l-cysteine desulfhydrase|cystathionine gamma-lyase}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-15129

  • direction:
    • left-to-right
  • common-name:
    • cystathionine gamma-lyase
    • l-cysteine desulfhydrase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LCYSDEG-PWY, L-cysteine degradation II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119157
  • RHEA: