Difference between revisions of "RXN-15133"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN] == * direction: ** l...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCDH_LPAREN_q8_RPAREN_m SUCDH_LPAREN_q8_RPAREN_m] == * direction: ** reversible * common-name: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCDH_LPAREN_q8_RPAREN_m SUCDH_LPAREN_q8_RPAREN_m] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
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** succinate dehydrogenase (ubiquinone)
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* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.1.1.45 ec-4.1.1.45]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[2-AMINOMUCONATE_SEMIALDEHYDE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1.0 [[SUC]][m] '''+''' 1.0 [[UBIQUINONE-8]][m] '''<=>''' 1.0 [[CPD-9956]][m] '''+''' 1.0 [[FUM]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02880]]
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* Gene: [[SJ01012]]
−
** Category: [[annotation]]
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** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02118]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5654]], 2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5654 PWY-5654]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5652 PWY-5652]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5647]], 2-nitrobenzoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5647 PWY-5647]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16558 16558]
+
{{#set: common-name=succinate dehydrogenase (ubiquinone)}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04323 R04323]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common-name=2-amino-3-carboxymuconate-6-semialdehyde decarboxylase}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec-number=ec-4.1.1.45}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:30, 27 August 2019

Reaction SUCDH_LPAREN_q8_RPAREN_m

  • direction:
    • reversible
  • common-name:
    • succinate dehydrogenase (ubiquinone)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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