Difference between revisions of "RXN-15205"
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(Created page with "Category:reaction == Reaction RXN-6550 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] == Reaction formula == * 1 2-KET...") |
(Created page with "Category:reaction == Reaction RXN1F-167 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] == Reaction formula == * 1 2-KE...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN1F-167 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
Line 6: | Line 6: | ||
** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] | ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-695]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-10332]][c] '''+''' 1 [[SUC]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* Gene: [[SJ14675]] | * Gene: [[SJ14675]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ14677]] |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08018]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
Line 22: | Line 26: | ||
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ07557]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): |
− | ** ''' | + | ** '''2''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
Line 33: | Line 39: | ||
== External links == | == External links == | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05097 R05097] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
{{#set: ec-number=ec-1.14.11}} | {{#set: ec-number=ec-1.14.11}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=6}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} |
Revision as of 15:34, 5 January 2021
Contents
Reaction RXN1F-167
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 CPD-695[c] + 1 OXYGEN-MOLECULE[c] => 1 CARBON-DIOXIDE[c] + 1 CPD-10332[c] + 1 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ14675
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14677
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ08018
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14670
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14672
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ07557
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5035, gibberellin biosynthesis III (early C-13 hydroxylation):
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- LIGAND-RXN: