Difference between revisions of "RXN-15212"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6433 PWY-6433] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction ADENODEAMIN-RXN == * direction: ** left-to-right * common-name: ** adenosine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.4 e...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6433 PWY-6433] ==
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== Reaction ADENODEAMIN-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
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** hydroxylated fatty acid biosynthesis (plants)
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** adenosine deaminase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-13322]]
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** [http://enzyme.expasy.org/EC/3.5.4.4 ec-3.5.4.4]
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* [[RXN-14484]]
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== Reaction formula ==
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* [[RXN-14485]]
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* 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
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* [[RXN-14491]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-14492]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-14493]]
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* Gene: [[SJ22508]]
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* [[RXN-14494]]
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** Category: [[annotation]]
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* [[RXN-16149]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-16150]]
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* Gene: [[SJ12082]]
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* [[RXN-16151]]
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** Category: [[annotation]]
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* [[RXN-16152]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-16153]]
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* Gene: [[SJ17056]]
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* [[RXN-16154]]
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** Category: [[annotation]]
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* [[RXN-16155]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-16157]]
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** Category: [[orthology]]
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* [[RXN-16158]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-9670]]
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* Gene: [[SJ04837]]
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== Reaction(s) not found ==
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14488 RXN-14488]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14495 RXN-14495]
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* Gene: [[SJ11072]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16148 RXN-16148]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14486 RXN-14486]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16156 RXN-16156]
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* Gene: [[SJ20035]]
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{{#set: taxonomic-range=tax-33090}}
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** Category: [[annotation]]
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{{#set: common-name=hydroxylated fatty acid biosynthesis (plants)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb reaction found=17}}
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* Gene: [[SJ10996]]
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{{#set: completion rate=0.77}}
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** Category: [[annotation]]
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{{#set: nb total reaction=22}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY-6611]], adenine and adenosine salvage V:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II:
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6609]], adenine and adenosine salvage III:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1296]], purine ribonucleosides degradation:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P22333 P22333]
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** [http://www.uniprot.org/uniprot/P00813 P00813]
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** [http://www.uniprot.org/uniprot/P03958 P03958]
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** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
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** [http://www.uniprot.org/uniprot/P55266 P55266]
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** [http://www.uniprot.org/uniprot/P53984 P53984]
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{{#set: direction=left-to-right}}
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{{#set: common-name=adenosine deaminase}}
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{{#set: ec-number=ec-3.5.4.4}}
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{{#set: nb gene associated=7}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:44, 18 December 2020

Reaction ADENODEAMIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenosine deaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6611, adenine and adenosine salvage V:
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609, adenine and adenosine salvage III:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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