Difference between revisions of "RXN-15285"

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(Created page with "Category:reaction == Reaction 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN == * direction: ** left-to-right * common-name: ** 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase * e...")
(Created page with "Category:reaction == Reaction PALMITOYL-COA-HYDROLASE-RXN == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN ==
+
== Reaction PALMITOYL-COA-HYDROLASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
+
** palmitoyl-coa hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
+
** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OCTAPRENYL-METHOXY-BENZOQUINONE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[OCTAPRENYL-METHYL-METHOXY-BENZQ]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PALMITYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ18316]]
−
* Gene: [[SJ11297]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02842]]
+
* Gene: [[SJ09703]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02693]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07072]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20751]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ11757]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00609]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
+
* [[PWY-321]], cutin biosynthesis:
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
+
* [[PWY-5994]], palmitate biosynthesis (animals and fungi, cytoplasm):
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27775 27775]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16645 16645]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01274 R01274]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q64559 Q64559]
 +
** [http://www.uniprot.org/uniprot/O14734 O14734]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-octaprenyl-6-methoxy-1,4-benzoquinone methylase}}
+
{{#set: common-name=palmitoyl-coa hydrolase}}
−
{{#set: ec-number=ec-2.1.1.201}}
+
{{#set: ec-number=ec-3.1.2.2}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 13:13, 14 January 2021

Reaction PALMITOYL-COA-HYDROLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • palmitoyl-coa hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-321, cutin biosynthesis:
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (animals and fungi, cytoplasm):
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis:
    • 8 reactions found over 18 reactions in the full pathway

Reconstruction information

External links





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