Difference between revisions of "RXN-15510"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol 3-kinase ** 1-phosphatidylinosito...")
(Created page with "Category:reaction == Reaction NAD-SYNTH-GLN-RXN == * direction: ** left-to-right * common-name: ** nad+ synthetase, glutamine dependent * ec-number: ** [http://enzyme.expa...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN ==
+
== Reaction NAD-SYNTH-GLN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphatidylinositol 3-kinase
+
** nad+ synthetase, glutamine dependent
−
** 1-phosphatidylinositol-3-kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.137 ec-2.7.1.137]
+
** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-177]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10785]]
+
* Gene: [[SJ20196]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02006]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17148]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ12193]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis:
+
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle):
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle):
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5381]], pyridine nucleotide cycling (plants):
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12710 12710]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03362 R03362]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22543 P22543]
+
** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
−
** [http://www.uniprot.org/uniprot/Q13315 Q13315]
+
** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
−
** [http://www.uniprot.org/uniprot/P32871 P32871]
+
** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
−
** [http://www.uniprot.org/uniprot/P42338 P42338]
+
** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
−
** [http://www.uniprot.org/uniprot/P42336 P42336]
 
−
** [http://www.uniprot.org/uniprot/P32600 P32600]
 
−
** [http://www.uniprot.org/uniprot/P35169 P35169]
 
−
** [http://www.uniprot.org/uniprot/O04269 O04269]
 
−
** [http://www.uniprot.org/uniprot/P91634 P91634]
 
−
** [http://www.uniprot.org/uniprot/Q92213 Q92213]
 
−
** [http://www.uniprot.org/uniprot/P54673 P54673]
 
−
** [http://www.uniprot.org/uniprot/P54674 P54674]
 
−
** [http://www.uniprot.org/uniprot/P54675 P54675]
 
−
** [http://www.uniprot.org/uniprot/P54677 P54677]
 
−
** [http://www.uniprot.org/uniprot/O35904 O35904]
 
−
** [http://www.uniprot.org/uniprot/P50520 P50520]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-phosphatidylinositol-3-kinase|phosphatidylinositol 3-kinase}}
+
{{#set: common-name=nad+ synthetase, glutamine dependent}}
−
{{#set: ec-number=ec-2.7.1.137}}
+
{{#set: ec-number=ec-6.3.5.1}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:26, 15 January 2021

Reaction NAD-SYNTH-GLN-RXN

  • direction:
    • left-to-right
  • common-name:
    • nad+ synthetase, glutamine dependent
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7761, NAD salvage pathway II (PNC IV cycle):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSAL-PWY, NAD salvage pathway I (PNC VI cycle):
    • 4 reactions found over 6 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD de novo biosynthesis I (from aspartate):
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5381, pyridine nucleotide cycling (plants):
    • 6 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-15510&oldid=116443"