Difference between revisions of "RXN-15512"

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(Created page with "Category:reaction == Reaction RXN3O-458 == * direction: ** left-to-right * common-name: ** phytosphingosine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.91 ec...")
(Created page with "Category:reaction == Reaction RXN-16135 == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase ** (2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa hydrat...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN3O-458 ==
+
== Reaction RXN-16135 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phytosphingosine kinase
+
** enoyl-coa hydratase
 +
** (2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa hydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.91 ec-2.7.1.91]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
−
* synonymous:
 
−
** phs kinase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PHYTOSPINGOSINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHTYOSPHINGOSINE-1-P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-17386]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-17387]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16261]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03913]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
−
** '''4''' reactions found over '''16''' reactions in the full pathway
+
** '''8''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33564 33564]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phytosphingosine kinase}}
+
{{#set: common-name=(2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa hydratase|enoyl-coa hydratase}}
−
{{#set: ec-number=ec-2.7.1.91}}
+
{{#set: ec-number=ec-4.2.1.17}}
−
{{#set: synonymous=phs kinase}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:19, 14 January 2021

Reaction RXN-16135

  • direction:
    • left-to-right
  • common-name:
    • enoyl-coa hydratase
    • (2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 8 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-15512&oldid=90497"