Difference between revisions of "RXN-15565"

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(Created page with "Category:reaction == Reaction ORNITHINE-CYCLODEAMINASE-RXN == * direction: ** left-to-right * common-name: ** ornithine cyclodeaminase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN-15565 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.3.2.25 ec-2.3.2.25] == Reaction formula == * 1 N-ter...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ORNITHINE-CYCLODEAMINASE-RXN ==
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== Reaction RXN-15565 ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
−
** ornithine cyclodeaminase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.1.12 ec-4.3.1.12]
+
** [http://enzyme.expasy.org/EC/2.3.2.25 ec-2.3.2.25]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[L-ORNITHINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PRO]][c]
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* 1 [[N-terminal-Amino-Acids]][c] '''+''' 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c] '''<=>''' 1 [[N-terminal-ubiquitinyl-proteins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10037]]
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* Gene: [[SJ20124]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway):
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis):
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* RHEA:
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* METANETX-RXN : MNXR119453
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24369 24369]
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{{#set: direction=reversible}}
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* LIGAND-RXN:
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{{#set: ec-number=ec-2.3.2.25}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q59701 Q59701]
 
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** [http://www.uniprot.org/uniprot/P09773 P09773]
 
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** [http://www.uniprot.org/uniprot/P33728 P33728]
 
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** [http://www.uniprot.org/uniprot/O68052 O68052]
 
−
** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=ornithine cyclodeaminase}}
 
−
{{#set: ec-number=ec-4.3.1.12}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-15565

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR119453





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