Difference between revisions of "RXN-15829"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-480 RXN66-480] == * direction: ** left-to-right * common-name: ** phytenoyl-coa synthetase **...")
 
(Created page with "Category:reaction == Reaction RXN-15829 == * direction: ** left-to-right * common-name: ** ubiquinol-cytochrome-c reductase ** ubiquinol--cytochrome-c reductase * ec-numbe...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-480 RXN66-480] ==
+
== Reaction RXN-15829 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phytenoyl-coa synthetase
+
** ubiquinol-cytochrome-c reductase
−
** acyl-coa synthetase
+
** ubiquinol--cytochrome-c reductase
−
** long-chain fatty acid-coa ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.10.2.2 ec-1.10.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14927]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14928]][c] '''+''' 1 [[PPI]][c]
+
* 4 [[PROTON]][c] '''+''' 2 [[Reduced-CycA1-cytochromes]][e] '''+''' 1 [[Ubiquinones]][c] '''=>''' 2 [[Oxidized-CycA1-cytochromes]][e] '''+''' 2 [[PROTON]][e] '''+''' 1 [[Ubiquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ16637]]
−
* Gene: [[SJ08691]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ08690]]
+
* Gene: [[SJ13715]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ08692]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05591]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ03650]]
+
* Gene: [[SJ03106]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13972]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
+
* [[PWY-6692]], Fe(II) oxidation:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR119658
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=long-chain fatty acid-coa ligase|acyl-coa synthetase|phytenoyl-coa synthetase}}
+
{{#set: common-name=ubiquinol-cytochrome-c reductase|ubiquinol--cytochrome-c reductase}}
−
{{#set: ec-number=ec-6.2.1.3}}
+
{{#set: ec-number=ec-1.10.2.2}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-15829

  • direction:
    • left-to-right
  • common-name:
    • ubiquinol-cytochrome-c reductase
    • ubiquinol--cytochrome-c reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6692, Fe(II) oxidation:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119658





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