Difference between revisions of "RXN-15844"

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(Created page with "Category:reaction == Reaction ACETYLORNDEACET-RXN == * direction: ** reversible * common-name: ** acetylornithine deacetylase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-15844 == * direction: ** left-to-right * common-name: ** 25s rrna (cytosine2278-c5)-methyltransferase * ec-number: ** [http://enzyme.expa...")
 
(6 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACETYLORNDEACET-RXN ==
+
== Reaction RXN-15844 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** acetylornithine deacetylase
+
** 25s rrna (cytosine2278-c5)-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.16 ec-3.5.1.16]
+
** [http://enzyme.expasy.org/EC/2.1.1.311 ec-2.1.1.311]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[L-ORNITHINE]][c]
+
* 1 [[Cytosine2278-in-25S-rRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-methylcytosine2278-in-25S-rRNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21981]]
+
* Gene: [[SJ20249]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09884]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01931]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ22394]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTORN-PWY]], L-ornithine biosynthesis I:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR119668
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15944 15944]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43181 43181]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00669 R00669]
+
{{#set: common-name=25s rrna (cytosine2278-c5)-methyltransferase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-2.1.1.311}}
−
** [http://www.uniprot.org/uniprot/P23908 P23908]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9CI04 Q9CI04]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: common-name=acetylornithine deacetylase}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: ec-number=ec-3.5.1.16}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-15844

  • direction:
    • left-to-right
  • common-name:
    • 25s rrna (cytosine2278-c5)-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR119668
  • RHEA:





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