Difference between revisions of "RXN-15878"

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(Created page with "Category:reaction == Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN == * direction: ** left-to-right * common-name: ** deoxyribodipyrimidine photolyase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction RXN0-7239 == * direction: ** left-to-right * common-name: ** oleoyl-coa synthetase ** long-chain fatty acid-coa ligase * ec-number: ** [http:...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN ==
+
== Reaction RXN0-7239 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** deoxyribodipyrimidine photolyase
+
** oleoyl-coa synthetase
 +
** long-chain fatty acid-coa ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 ec-4.1.99.3]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-deoxycytidine-thymidine-dimer]][c] '''+''' 1 [[Light]][c] '''=>''' 1 [[DNA-Cytidines]][c] '''+''' 1 [[DNA-thymidines]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[OLEATE-CPD]][e] '''+''' 1 [[PROTON]][e] '''=>''' 1 [[AMP]][c] '''+''' 1 [[OLEOYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08112]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ08691]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04101]]
+
* Gene: [[SJ03650]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13192]]
+
* Gene: [[SJ05591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 28: Line 42:
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
 
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
 
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
 
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
 
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
 
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
 
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
 
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
 
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
 
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
 
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
 
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
 
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
 
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
 
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
 
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=deoxyribodipyrimidine photolyase}}
+
{{#set: common-name=long-chain fatty acid-coa ligase|oleoyl-coa synthetase}}
−
{{#set: ec-number=ec-4.1.99.3}}
+
{{#set: ec-number=ec-6.2.1.3}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}

Revision as of 11:27, 15 January 2021

Reaction RXN0-7239

  • direction:
    • left-to-right
  • common-name:
    • oleoyl-coa synthetase
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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