Difference between revisions of "RXN-15878"

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(Created page with "Category:reaction == Reaction RXN-9361 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163] == Reaction formula == * 1 C...")
(Created page with "Category:reaction == Reaction RXN-15878 == * direction: ** left-to-right * common-name: ** 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase * ec-number: ** [http://...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9361 ==
+
== Reaction RXN-15878 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
+
** [http://enzyme.expasy.org/EC/1.17.7.3 ec-1.17.7.3]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12119]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12127]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[Reduced-flavodoxins]][c] '''=>''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 1 [[Oxidized-flavodoxins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07072]]
+
* Gene: [[SJ05642]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00609]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02693]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5890]], menaquinol-10 biosynthesis:
+
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR122777
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10859 R10859]
 +
* METANETX-RXN : MNXR114173
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44785 44785]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43606 43606]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.1.1.163}}
+
{{#set: common-name=1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase}}
{{#set: nb gene associated=6}}
+
{{#set: ec-number=ec-1.17.7.3}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-15878

  • direction:
    • left-to-right
  • common-name:
    • 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114173
  • RHEA: