Difference between revisions of "RXN-15889"

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(Created page with "Category:reaction == Reaction ExchangeSeed-ADENOSYLCOBALAMIN == * direction: ** reversible == Reaction formula == * 1.0 ADENOSYLCOBALAMIN[C-BOUNDARY] '''<=>''' 1.0 A...")
(Created page with "Category:reaction == Reaction NUCLEOSIDE-DIPHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** nucleoside diphosphate phosphohydrolase ** nucleoside-diphosp...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-ADENOSYLCOBALAMIN ==
+
== Reaction NUCLEOSIDE-DIPHOSPHATASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** nucleoside diphosphate phosphohydrolase
 +
** nucleoside-diphosphatase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.6.1.6 ec-3.6.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ADENOSYLCOBALAMIN]][C-BOUNDARY] '''<=>''' 1.0 [[ADENOSYLCOBALAMIN]][e]
+
* 1 [[Nucleoside-Diphosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ04502]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16444]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00329 R00329]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=nucleoside-diphosphatase|nucleoside diphosphate phosphohydrolase}}
 +
{{#set: ec-number=ec-3.6.1.6}}
 +
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:18, 14 January 2021

Reaction NUCLEOSIDE-DIPHOSPHATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • nucleoside diphosphate phosphohydrolase
    • nucleoside-diphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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