Difference between revisions of "RXN-16016"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPGUANYLTRANGDP-RXN MANNPGUANYLTRANGDP-RXN] == * direction: ** reversible * common-name: ** mann...")
(Created page with "Category:reaction == Reaction RXN-16016 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 ACETYL-C...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPGUANYLTRANGDP-RXN MANNPGUANYLTRANGDP-RXN] ==
+
== Reaction RXN-16016 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** mannose-1-phosphate guanylyltransferase (gdp)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.22 ec-2.7.7.22]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP]][c] '''+''' 1 [[MANNOSE-1P]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[GDP-MANNOSE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 9 [[MALONYL-COA]][c] '''+''' 14 [[NADPH]][c] '''+''' 22 [[PROTON]][c] '''=>''' 1 [[ARACHIDONIC_ACID]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 10 [[CO-A]][c] '''+''' 14 [[NADP]][c] '''+''' 8 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01884]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18078]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7583]], arachidonate biosynthesis II (bacteria):
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR119773
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12905 12905]
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{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
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{{#set: ec-number=ec-2.3.1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00883 R00883]
+
{{#set: nb gene associated=0}}
−
* UNIPROT:
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P07874 P07874]
+
{{#set: reconstruction category=gap-filling}}
−
** [http://www.uniprot.org/uniprot/P24174 P24174]
+
{{#set: reconstruction tool=meneco}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: common-name=mannose-1-phosphate guanylyltransferase (gdp)}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: ec-number=ec-2.7.7.22}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
 

Latest revision as of 11:21, 18 March 2021

Reaction RXN-16016

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7583, arachidonate biosynthesis II (bacteria):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119773





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