Difference between revisions of "RXN-16016"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R230-RXN R230-RXN] == * direction: ** reversible * common-name: ** (2r)-3-sulfolactate dehydrogenas...")
(Created page with "Category:reaction == Reaction RXN-14727 == * direction: ** left-to-right * common-name: ** amidase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4] == Reac...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R230-RXN R230-RXN] ==
+
== Reaction RXN-14727 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** (2r)-3-sulfolactate dehydrogenase (nad+)
+
** amidase
−
** (r)-sulfolactate dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.337 ec-1.1.1.337]
+
** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-367]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PROPIONAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROPIONATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06713]]
+
* Gene: [[SJ16279]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11012]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22527]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01848]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P261-PWY]], coenzyme M biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=P261-PWY P261-PWY]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15536 15536]
+
{{#set: common-name=amidase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-3.5.1.4}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07136 R07136]
+
{{#set: nb gene associated=4}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=0}}
−
{{#set: common-name=(r)-sulfolactate dehydrogenase|(2r)-3-sulfolactate dehydrogenase (nad+)}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: ec-number=ec-1.1.1.337}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:41, 18 December 2020

Reaction RXN-14727

  • direction:
    • left-to-right
  • common-name:
    • amidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-16016&oldid=50139"