Difference between revisions of "RXN-16016"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPGUANYLTRANGDP-RXN MANNPGUANYLTRANGDP-RXN] == * direction: ** reversible * common-name: ** mann...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R230-RXN R230-RXN] == * direction: ** reversible * common-name: ** (2r)-3-sulfolactate dehydrogenas...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPGUANYLTRANGDP-RXN MANNPGUANYLTRANGDP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R230-RXN R230-RXN] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** mannose-1-phosphate guanylyltransferase (gdp)
+
** (2r)-3-sulfolactate dehydrogenase (nad+)
 +
** (r)-sulfolactate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.22 ec-2.7.7.22]
+
** [http://enzyme.expasy.org/EC/1.1.1.337 ec-1.1.1.337]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP]][c] '''+''' 1 [[MANNOSE-1P]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[GDP-MANNOSE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-367]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01884]]
+
* Gene: [[SJ06713]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18078]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[P261-PWY]], coenzyme M biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=P261-PWY P261-PWY]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12905 12905]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15536 15536]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00883 R00883]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07136 R07136]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07874 P07874]
 
−
** [http://www.uniprot.org/uniprot/P24174 P24174]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=mannose-1-phosphate guanylyltransferase (gdp)}}
+
{{#set: common-name=(r)-sulfolactate dehydrogenase|(2r)-3-sulfolactate dehydrogenase (nad+)}}
−
{{#set: ec-number=ec-2.7.7.22}}
+
{{#set: ec-number=ec-1.1.1.337}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction R230-RXN

  • direction:
    • reversible
  • common-name:
    • (2r)-3-sulfolactate dehydrogenase (nad+)
    • (r)-sulfolactate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P261-PWY, coenzyme M biosynthesis I: P261-PWY
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation: PWY-6642
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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