Difference between revisions of "RXN-16024"

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(Created page with "Category:reaction == Reaction PYRIDOXINE-4-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** pyridoxine 4-dehydrogenase/pyridoxal reductase * ec-number: **...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CU+2 == * direction: ** reversible == Reaction formula == * 1.0 CU+2[C-BOUNDARY] '''<=>''' 1.0 CU+2[e] == Gene(s) associ...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PYRIDOXINE-4-DEHYDROGENASE-RXN ==
+
== Reaction ExchangeSeed-CU+2 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** pyridoxine 4-dehydrogenase/pyridoxal reductase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.65 ec-1.1.1.65]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL]][c]
+
* 1.0 [[CU+2]][C-BOUNDARY] '''<=>''' 1.0 [[CU+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ15799]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20140]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7282]], 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16132 16132]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01708 R01708]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/O14295 O14295]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=pyridoxine 4-dehydrogenase/pyridoxal reductase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-1.1.1.65}}
+
{{#set: nb pathway associated=0}}
{{#set: nb gene associated=2}}
+
{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 15:35, 5 January 2021

Reaction ExchangeSeed-CU+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links