Difference between revisions of "RXN-16030"

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(Created page with "Category:reaction == Reaction RXN-14520 == * direction: ** left-to-right * common-name: ** 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN-10658 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14520 ==
+
== Reaction RXN-10658 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.231 ec-2.3.1.231]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[yW-58]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[tRNAPhe-wybutosine]][c]
+
* 1 [[Cis-Delta7-tetradecenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13616]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ15983]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15984]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00005]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7283]], wybutosine biosynthesis:
+
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate):
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37120 37120]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase}}
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: ec-number=ec-2.3.1.231}}
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=7}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:20, 14 January 2021

Reaction RXN-10658

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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