Difference between revisions of "RXN-16032"

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(Created page with "Category:reaction == Reaction RXN-11370 == * direction: ** left-to-right * common-name: ** diphthine synthase == Reaction formula == * 1 2-3-CARBOXY-3-AMINOPROPYL-L-HIST...")
(Created page with "Category:reaction == Reaction RXN0-308 == * direction: ** left-to-right * common-name: ** l-cysteine:[protein cysteine] sulfurtransferase * ec-number: ** [http://enzyme.ex...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11370 ==
+
== Reaction RXN0-308 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** diphthine synthase
+
** l-cysteine:[protein cysteine] sulfurtransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-3-CARBOXY-3-AMINOPROPYL-L-HISTIDINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-3-CARBOXY-3-METHYLAMMONIOPROPYL-L-]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08595]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ17324]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03223]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13485]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04060]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09474]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19133]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria):
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-1021]], L-alanine biosynthesis III:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6823]], molybdenum cofactor biosynthesis:
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7904]], tRNA-uridine 2-thiolation (thermophilic bacteria):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7892]], tRNA-uridine 2-thiolation and selenation (bacteria):
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7891]], tRNA-uridine 2-thiolation (yeast mitochondria):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria):
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic):
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20146 20146]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58670 Q58670]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04481 R04481]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diphthine synthase}}
+
{{#set: common-name=l-cysteine:[protein cysteine] sulfurtransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.8.1.7}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=9}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:02, 14 January 2021

Reaction RXN0-308

  • direction:
    • left-to-right
  • common-name:
    • l-cysteine:[protein cysteine] sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6891, thiazole biosynthesis II (aerobic bacteria):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria):
    • 5 reactions found over 7 reactions in the full pathway
  • PWY0-1021, L-alanine biosynthesis III:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6823, molybdenum cofactor biosynthesis:
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7904, tRNA-uridine 2-thiolation (thermophilic bacteria):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7892, tRNA-uridine 2-thiolation and selenation (bacteria):
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-7891, tRNA-uridine 2-thiolation (yeast mitochondria):
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889, tRNA-uridine 2-thiolation (mammalian mitochondria):
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7888, tRNA-uridine 2-thiolation (cytoplasmic):
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "l-cysteine:[protein cysteine] sulfurtransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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