Difference between revisions of "RXN-16032"

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(Created page with "Category:reaction == Reaction RXN-9666 == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3...")
(Created page with "Category:reaction == Reaction SPERMINE-SYNTHASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22] == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9666 ==
+
== Reaction SPERMINE-SYNTHASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** palmitoyl-coa hydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
+
** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OLEOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09703]]
+
* Gene: [[SJ19088]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05219]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-321]], cutin biosynthesis:
+
* [[ARGSPECAT-PWY]], spermine biosynthesis:
−
** '''3''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-5996]], oleate biosynthesis II (animals and fungi):
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-1121]], suberin monomers biosynthesis:
+
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II:
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
** '''4''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6733]], sporopollenin precursors biosynthesis:
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19974 19974]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08176 R08176]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P52788 P52788]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=palmitoyl-coa hydrolase}}
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{{#set: ec-number=ec-2.5.1.22}}
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{{#set: ec-number=ec-3.1.2.2}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:03, 5 January 2021

Reaction SPERMINE-SYNTHASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGSPECAT-PWY, spermine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • POLYAMINSYN3-PWY, superpathway of polyamine biosynthesis II:
    • 4 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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