Difference between revisions of "RXN-16043"

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(Created page with "Category:reaction == Reaction RXN-17794 == * direction: ** left-to-right * common-name: ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
(Created page with "Category:reaction == Reaction OMEGA-AMIDASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.3 ec-3.5.1.3] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17794 ==
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== Reaction OMEGA-AMIDASE-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** 3-hydroxyacyl-coa dehydrogenase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/3.5.1.3 ec-3.5.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-19154]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19157]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[DICARBOXYLIC-ACID-MONOAMIDES]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[dicarboxylate]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ02846]]
* Gene: [[SJ01444]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ16180]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ16470]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ17348]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ06127]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03804 R03804]
{{#set: ec-number=ec-1.1.1.35}}
+
{{#set: direction=reversible}}
{{#set: nb gene associated=8}}
+
{{#set: ec-number=ec-3.5.1.3}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:33, 5 January 2021

Reaction OMEGA-AMIDASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links