Difference between revisions of "RXN-16049"

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(Created page with "Category:reaction == Reaction AIRCARBOXY-RXN == * direction: ** reversible * common-name: ** phosphoribosylaminoimidazole carboxylase * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction RXN-11501 == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AIRCARBOXY-RXN ==
+
== Reaction RXN-11501 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoribosylaminoimidazole carboxylase
+
** alpha-galactosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.21 ec-4.1.1.21]
+
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[CPD-1099]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18574]]
+
* Gene: [[SJ02145]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11301]]
+
* Gene: [[SJ02144]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05258]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
+
* [[PWY-6527]], stachyose degradation:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10794 10794]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
+
{{#set: common-name=alpha-galactosidase}}
−
** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
+
{{#set: ec-number=ec-3.2.1.22}}
−
** [http://www.uniprot.org/uniprot/O66608 O66608]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/O67239 O67239]
 
−
** [http://www.uniprot.org/uniprot/P12045 P12045]
 
−
** [http://www.uniprot.org/uniprot/P09029 P09029]
 
−
** [http://www.uniprot.org/uniprot/P12044 P12044]
 
−
** [http://www.uniprot.org/uniprot/P21264 P21264]
 
−
** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
 
−
** [http://www.uniprot.org/uniprot/P15567 P15567]
 
−
** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
 
−
** [http://www.uniprot.org/uniprot/P43849 P43849]
 
−
** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
 
−
** [http://www.uniprot.org/uniprot/P43850 P43850]
 
−
** [http://www.uniprot.org/uniprot/Q58033 Q58033]
 
−
** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
 
−
** [http://www.uniprot.org/uniprot/P22234 P22234]
 
−
** [http://www.uniprot.org/uniprot/P22348 P22348]
 
−
** [http://www.uniprot.org/uniprot/Q01930 Q01930]
 
−
** [http://www.uniprot.org/uniprot/P55195 P55195]
 
−
** [http://www.uniprot.org/uniprot/P50504 P50504]
 
−
** [http://www.uniprot.org/uniprot/Q55498 Q55498]
 
−
** [http://www.uniprot.org/uniprot/P74724 P74724]
 
−
** [http://www.uniprot.org/uniprot/O80937 O80937]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=phosphoribosylaminoimidazole carboxylase}}
 
−
{{#set: ec-number=ec-4.1.1.21}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:14, 14 January 2021

Reaction RXN-11501

  • direction:
    • left-to-right
  • common-name:
    • alpha-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6527, stachyose degradation:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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