Difference between revisions of "RXN-16066"

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(Created page with "Category:reaction == Reaction CREATINE-KINASE-RXN == * direction: ** reversible * common-name: ** creatine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.3.2 ec-2...")
(Created page with "Category:reaction == Reaction ACYLCOASYN-RXN == * direction: ** left-to-right * common-name: ** 2,3,4-saturated fatty acyl-coa synthetase ** fatty acyl-coa synthetase ** l...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CREATINE-KINASE-RXN ==
+
== Reaction ACYLCOASYN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** creatine kinase
+
** 2,3,4-saturated fatty acyl-coa synthetase
 +
** fatty acyl-coa synthetase
 +
** long-chain fatty acid-coa ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.3.2 ec-2.7.3.2]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 +
* synonymous:
 +
** fatty acid thiokinase (long-chain)
 +
** acyl-activating enzyme
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CREATINE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CREATINE-P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05313]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ05591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03650]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ06630]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08690]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08691]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6158]], creatine-phosphate biosynthesis:
+
* [[PWY-7288]], fatty acid &beta;-oxidation VII (yeast peroxisome):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid &beta;-oxidation VI (mammalian peroxisome):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5136]], fatty acid &beta;-oxidation II (plant peroxisome):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 26: Line 55:
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17160 17160]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01881 R01881]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07310 P07310]
+
** [http://www.uniprot.org/uniprot/P18163 P18163]
−
** [http://www.uniprot.org/uniprot/P05123 P05123]
+
** [http://www.uniprot.org/uniprot/P39518 P39518]
−
** [http://www.uniprot.org/uniprot/P05122 P05122]
+
** [http://www.uniprot.org/uniprot/O51162 O51162]
−
** [http://www.uniprot.org/uniprot/P11009 P11009]
+
** [http://www.uniprot.org/uniprot/P39002 P39002]
−
** [http://www.uniprot.org/uniprot/P12532 P12532]
+
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
−
** [http://www.uniprot.org/uniprot/P16641 P16641]
+
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
−
** [http://www.uniprot.org/uniprot/P17540 P17540]
+
** [http://www.uniprot.org/uniprot/O83181 O83181]
−
** [http://www.uniprot.org/uniprot/Q7LZG7 Q7LZG7]
+
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
−
** [http://www.uniprot.org/uniprot/Q04447 Q04447]
+
** [http://www.uniprot.org/uniprot/P94547 P94547]
−
** [http://www.uniprot.org/uniprot/P18294 P18294]
+
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
−
** [http://www.uniprot.org/uniprot/Q9PSI5 Q9PSI5]
+
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
−
** [http://www.uniprot.org/uniprot/Q7LZG6 Q7LZG6]
+
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
−
** [http://www.uniprot.org/uniprot/Q7LZG8 Q7LZG8]
+
** [http://www.uniprot.org/uniprot/P44446 P44446]
−
** [http://www.uniprot.org/uniprot/Q7M337 Q7M337]
+
** [http://www.uniprot.org/uniprot/O30039 O30039]
−
** [http://www.uniprot.org/uniprot/P05124 P05124]
+
** [http://www.uniprot.org/uniprot/O51539 O51539]
−
** [http://www.uniprot.org/uniprot/Q9PSI4 Q9PSI4]
+
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
−
** [http://www.uniprot.org/uniprot/Q7M336 Q7M336]
+
** [http://www.uniprot.org/uniprot/P33121 P33121]
−
** [http://www.uniprot.org/uniprot/P00565 P00565]
+
** [http://www.uniprot.org/uniprot/P33124 P33124]
−
** [http://www.uniprot.org/uniprot/P12277 P12277]
+
** [http://www.uniprot.org/uniprot/P30624 P30624]
−
** [http://www.uniprot.org/uniprot/P06732 P06732]
+
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
−
** [http://www.uniprot.org/uniprot/P00567 P00567]
+
** [http://www.uniprot.org/uniprot/P69451 P69451]
−
** [http://www.uniprot.org/uniprot/P00563 P00563]
+
** [http://www.uniprot.org/uniprot/P69452 P69452]
−
** [http://www.uniprot.org/uniprot/P07335 P07335]
+
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
−
** [http://www.uniprot.org/uniprot/P00564 P00564]
+
** [http://www.uniprot.org/uniprot/P47912 P47912]
−
** [http://www.uniprot.org/uniprot/P00566 P00566]
+
** [http://www.uniprot.org/uniprot/P73004 P73004]
−
** [http://www.uniprot.org/uniprot/P04414 P04414]
+
** [http://www.uniprot.org/uniprot/O81614 O81614]
−
** [http://www.uniprot.org/uniprot/P24722 P24722]
+
** [http://www.uniprot.org/uniprot/O15840 O15840]
−
** [http://www.uniprot.org/uniprot/P09605 P09605]
+
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
−
** [http://www.uniprot.org/uniprot/P25809 P25809]
+
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
−
** [http://www.uniprot.org/uniprot/P30275 P30275]
+
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
 +
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
 +
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
 +
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
 +
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
 +
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
 +
** [http://www.uniprot.org/uniprot/O60135 O60135]
 
</div>
 
</div>
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=creatine kinase}}
+
{{#set: common-name=long-chain fatty acid-coa ligase|fatty acyl-coa synthetase|2,3,4-saturated fatty acyl-coa synthetase}}
−
{{#set: ec-number=ec-2.7.3.2}}
+
{{#set: ec-number=ec-6.2.1.3}}
−
{{#set: nb gene associated=2}}
+
{{#set: synonymous=fatty acid thiokinase (long-chain)|acyl-activating enzyme}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:06, 5 January 2021

Reaction ACYLCOASYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2,3,4-saturated fatty acyl-coa synthetase
    • fatty acyl-coa synthetase
    • long-chain fatty acid-coa ligase
  • ec-number:
  • synonymous:
    • fatty acid thiokinase (long-chain)
    • acyl-activating enzyme

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7288, fatty acid β-oxidation VII (yeast peroxisome):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (mammalian peroxisome):
    • 6 reactions found over 7 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I (generic):
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5136, fatty acid β-oxidation II (plant peroxisome):
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-16066&oldid=64282"