Difference between revisions of "RXN-16096"

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(Created page with "Category:reaction == Reaction RXN-7659 == * direction: ** reversible * common-name: ** dihydrogeranylgeranyl diphosphate reductase == Reaction formula == * 1 CPD-7003[...")
(Created page with "Category:reaction == Reaction RXN-16096 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-7659 ==
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== Reaction RXN-16096 ==
 
* direction:
 
* direction:
−
** reversible
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** left-to-right
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* common-name:
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* ec-number:
−
** dihydrogeranylgeranyl diphosphate reductase
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** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-7003]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-7002]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CPD-17347]][c] '''=>''' 1 [[CPD-17348]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ15264]]
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* Gene: [[SJ00783]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ06882]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5063]], phytyl diphosphate biosynthesis:
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* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals):
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes):
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6598]], sciadonate biosynthesis:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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* METANETX-RXN : MNXR119844
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** [http://www.genome.jp/dbget-bin/www_bget?R08755 R08755]
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{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
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{{#set: ec-number=ec-4.2.1.134}}
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{{#set: common-name=dihydrogeranylgeranyl diphosphate reductase}}
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{{#set: nb gene associated=2}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-16096

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals):
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes):
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119844





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