Difference between revisions of "RXN-161"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction SUCCINYLDIAMINOPIMTRANS-RXN == * direction: ** reversible * common-name: ** n-succinyldiaminopimelate aminotransferase * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction RXN-161 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1] == Reaction formula == * 1 BUTANOL[c]...")
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SUCCINYLDIAMINOPIMTRANS-RXN ==
+
== Reaction RXN-161 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** n-succinyldiaminopimelate aminotransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.6.1.17 ec-2.6.1.17]
+
** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-SUCCINYLLL-2-6-DIAMINOPIMELATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[N-SUCCINYL-2-AMINO-6-KETOPIMELATE]][c]
+
* 1 [[BUTANOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[BUTANAL]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18200]]
+
* Gene: [[SJ09853]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ07216]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08678]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
+
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered):
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6583]], pyruvate fermentation to butanol I:
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered):
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95728
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11963 11963]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33199 33199]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R04475 R04475]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03544 R03544]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=n-succinyldiaminopimelate aminotransferase}}
+
{{#set: ec-number=ec-1.1.1}}
{{#set: ec-number=ec-2.6.1.17}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=3}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-161

  • direction:
    • reversible
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7396, butanol and isobutanol biosynthesis (engineered):
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-6583, pyruvate fermentation to butanol I:
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-6883, pyruvate fermentation to butanol II (engineered):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95728
  • RHEA:
  • LIGAND-RXN: