Difference between revisions of "RXN-16113"

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(Created page with "Category:reaction == Reaction SUCCINYLDIAMINOPIMTRANS-RXN == * direction: ** reversible * common-name: ** n-succinyldiaminopimelate aminotransferase * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction RXN-16991 == * direction: ** left-to-right * common-name: ** n-3-epoxysuccinamoyl-(s)-2,3-diaminopropanoyl-l-valine synthase * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SUCCINYLDIAMINOPIMTRANS-RXN ==
+
== Reaction RXN-16991 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** n-succinyldiaminopimelate aminotransferase
+
** n-3-epoxysuccinamoyl-(s)-2,3-diaminopropanoyl-l-valine synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.6.1.17 ec-2.6.1.17]
+
** [http://enzyme.expasy.org/EC/6.3.2.47 ec-6.3.2.47]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-SUCCINYLLL-2-6-DIAMINOPIMELATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[N-SUCCINYL-2-AMINO-6-KETOPIMELATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-18319]][c] '''+''' 1 [[VAL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-18309]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18200]]
+
* Gene: [[SJ11003]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ07216]]
+
* Gene: [[SJ05967]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08678]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
+
* [[PWY-7706]], dapdiamides biosynthesis:
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=left-to-right}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11963 11963]
+
{{#set: common-name=n-3-epoxysuccinamoyl-(s)-2,3-diaminopropanoyl-l-valine synthase}}
* LIGAND-RXN:
+
{{#set: ec-number=ec-6.3.2.47}}
** [http://www.genome.jp/dbget-bin/www_bget?R04475 R04475]
+
{{#set: nb gene associated=2}}
{{#set: direction=reversible}}
 
{{#set: common-name=n-succinyldiaminopimelate aminotransferase}}
 
{{#set: ec-number=ec-2.6.1.17}}
 
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 15:08, 5 January 2021

Reaction RXN-16991

  • direction:
    • left-to-right
  • common-name:
    • n-3-epoxysuccinamoyl-(s)-2,3-diaminopropanoyl-l-valine synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7706, dapdiamides biosynthesis:
    • 4 reactions found over 13 reactions in the full pathway

Reconstruction information

External links