Difference between revisions of "RXN-16133"

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(Created page with "Category:reaction == Reaction UDPNACETYLMURAMATEDEHYDROG-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98] == Reactio...")
(Created page with "Category:reaction == Reaction RXN-14965 == * direction: ** left-to-right * common-name: ** glycerol-1-phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.21 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UDPNACETYLMURAMATEDEHYDROG-RXN ==
+
== Reaction RXN-14965 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** glycerol-1-phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98]
+
** [http://enzyme.expasy.org/EC/3.1.3.21 ec-3.1.3.21]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-N-ACETYLMURAMATE]][c]
+
* 1 [[GLYCEROL-3P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ19426]]
−
* Gene: [[SJ03311]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21113]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21111]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21294]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19720]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03315]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21114]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20537]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing):
+
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY0-1261]], anhydromuropeptides recycling I:
 
−
** '''3''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7953]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing):
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing):
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12250 12250]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
 
−
** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
 
−
** [http://www.uniprot.org/uniprot/P44605 P44605]
 
−
** [http://www.uniprot.org/uniprot/P08373 P08373]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.3.1.98}}
+
{{#set: common-name=glycerol-1-phosphatase}}
−
{{#set: nb gene associated=8}}
+
{{#set: ec-number=ec-3.1.3.21}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction RXN-14965

  • direction:
    • left-to-right
  • common-name:
    • glycerol-1-phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7385, 1,3-propanediol biosynthesis (engineered):
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-16133&oldid=101971"