Difference between revisions of "RXN-16157"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] == * direction: ** left-to-right * common-name: ** isopentenyl-adenosine trna...")
(Created page with "Category:reaction == Reaction RXN-10740 == * direction: ** left-to-right * common-name: ** udp-4-keto-rhamnose-4-keto-reductase ** udp-l-rhamnose synthase * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] ==
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== Reaction RXN-10740 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** isopentenyl-adenosine trna methylthiolase
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** udp-4-keto-rhamnose-4-keto-reductase
 +
** udp-l-rhamnose synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.4.3 ec-2.8.4.3]
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** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[CPD-11592]][c] '''+''' 1 [[MET]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c]
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* 1 [[CPD-11540]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-L-RHAMNOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10587]]
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* Gene: [[SJ16241]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ10588]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-3261]], UDP-β-L-rhamnose biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
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* LIGAND-RXN:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37068 37068]
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** [http://www.genome.jp/dbget-bin/www_bget?R08705 R08705]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=isopentenyl-adenosine trna methylthiolase}}
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{{#set: common-name=udp-l-rhamnose synthase|udp-4-keto-rhamnose-4-keto-reductase}}
{{#set: ec-number=ec-2.8.4.3}}
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{{#set: ec-number=ec-1.1.1}}
{{#set: nb gene associated=2}}
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{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:39, 18 December 2020

Reaction RXN-10740

  • direction:
    • left-to-right
  • common-name:
    • udp-4-keto-rhamnose-4-keto-reductase
    • udp-l-rhamnose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3261, UDP-β-L-rhamnose biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links