Difference between revisions of "RXN-16158"

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(Created page with "Category:reaction == Reaction HOMOCYSMET-RXN == * direction: ** reversible * common-name: ** cobalamin-independent homocysteine transmethylase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction RXN-16158 == * direction: ** reversible * common-name: ** lysophospholipid (11z)-icosenoyltransferase * ec-number: ** [http://enzyme.expasy.o...")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOCYSMET-RXN ==
+
== Reaction RXN-16158 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** cobalamin-independent homocysteine transmethylase
+
** lysophospholipid (11z)-icosenoyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.14 ec-2.1.1.14]
+
** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[CPD-1301]][c] '''+''' 1 [[MET]][c]
+
* 1 [[CPD-15363]][c] '''+''' 1 [[Glycerolipids]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17404]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03226]]
+
* Gene: [[SJ13643]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09127]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10794]]
+
* Gene: [[SJ22477]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II:
+
* [[PWY-6433]], hydroxylated fatty acid biosynthesis (plants):
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''17''' reactions found over '''22''' reactions in the full pathway
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6151]], S-adenosyl-L-methionine cycle I:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-702]], L-methionine biosynthesis II (plants):
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR119900
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21199 21199]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P25665 P25665]
 
−
** [http://www.uniprot.org/uniprot/P45331 P45331]
 
−
** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
 
−
** [http://www.uniprot.org/uniprot/O26869 O26869]
 
−
** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
 
−
** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
 
−
** [http://www.uniprot.org/uniprot/P05694 P05694]
 
−
** [http://www.uniprot.org/uniprot/Q42699 Q42699]
 
−
** [http://www.uniprot.org/uniprot/Q39586 Q39586]
 
−
** [http://www.uniprot.org/uniprot/O48613 O48613]
 
−
** [http://www.uniprot.org/uniprot/P93263 P93263]
 
−
** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=cobalamin-independent homocysteine transmethylase}}
+
{{#set: common-name=lysophospholipid (11z)-icosenoyltransferase}}
−
{{#set: ec-number=ec-2.1.1.14}}
+
{{#set: ec-number=ec-2.3.1.23}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-16158

  • direction:
    • reversible
  • common-name:
    • lysophospholipid (11z)-icosenoyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6433, hydroxylated fatty acid biosynthesis (plants):
    • 17 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119900





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