Difference between revisions of "RXN-16158"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15740 RXN-15740] == * direction: ** left-to-right * common-name: ** glycerol-3-phosphate dehydr...")
(Created page with "Category:reaction == Reaction RXN-14275 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.m19 ec-1.1.1.m19] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15740 RXN-15740] ==
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== Reaction RXN-14275 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** glycerol-3-phosphate dehydrogenase, anaerobic
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/1.1.5.3 ec-1.1.5.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.m19 ec-1.1.1.m19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Menaquinones]][c] '''=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[Menaquinols]][c]
+
* 1 [[CPD-14916]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD0-2106]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18572]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1582]], glycerol-3-phosphate to fumarate electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1582 PWY0-1582]
+
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered):
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** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY0-1581]], nitrate reduction IX (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1581 PWY0-1581]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1591]], glycerol-3-phosphate to hydrogen peroxide electron transport: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1591 PWY0-1591]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29220 29220]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31196 31196]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04745 R04745]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glycerol-3-phosphate dehydrogenase, anaerobic}}
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{{#set: ec-number=ec-1.1.1.m19}}
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{{#set: ec-number=ec-1.1.5.3}}
+
{{#set: nb gene associated=0}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 20:38, 18 December 2020

Reaction RXN-14275

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6920, 6-gingerol analog biosynthesis (engineered):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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