Difference between revisions of "RXN-16165"

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(Created page with "Category:reaction == Reaction RXN-11319 == * direction: ** left-to-right * common-name: ** 2-iminoacetate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.19 e...")
(Created page with "Category:reaction == Reaction RXN-8773 == * direction: ** reversible * common-name: ** d-xylose reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11319 ==
+
== Reaction RXN-8773 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** 2-iminoacetate synthase
+
** d-xylose reductase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.99.19 ec-4.1.99.19]
+
** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADPH]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[CH33ADO]][c] '''+''' 1 [[CPD-108]][c] '''+''' 1 [[CPD-12279]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[NADP]][c] '''+''' 1 [[XYLITOL]][c] '''<=>''' 1 [[D-Xylopyranose]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17412]]
+
* Gene: [[SJ05644]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria):
+
* [[PWY-5516]], D-xylose degradation II:
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105261
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27448 27448]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R10246 R10246]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01431 R01431]
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26364 26364]
+
{{#set: common-name=d-xylose reductase}}
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-1.1.1.21}}
{{#set: common-name=2-iminoacetate synthase}}
 
{{#set: ec-number=ec-4.1.99.19}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:36, 15 March 2021

Reaction RXN-8773

  • direction:
    • reversible
  • common-name:
    • d-xylose reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5516, D-xylose degradation II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR105261
  • RHEA:
  • LIGAND-RXN: