Difference between revisions of "RXN-16261"

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(Created page with "Category:reaction == Reaction RXN-11881 == * direction: ** left-to-right * common-name: ** 4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol 14-demethylas...")
(Created page with "Category:reaction == Reaction RXN-1126 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12] == Reaction formula == * 1 ATP...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11881 ==
+
== Reaction RXN-1126 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol 14-demethylase
 
−
** 4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol demethylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.13.70 ec-1.14.13.70]
+
** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12852]][c] '''+''' 3 [[NADPH]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-12853]][c] '''+''' 1 [[FORMATE]][c] '''+''' 3 [[NADP]][c] '''+''' 4 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-676]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05072]]
+
* Gene: [[SJ03066]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16901]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7398]], coumarins biosynthesis (engineered):
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6673]], caffeoylglucarate biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36300 36300]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol 14-demethylase|4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol demethylase}}
+
{{#set: ec-number=ec-6.2.1.12}}
−
{{#set: ec-number=ec-1.14.13.70}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:08, 5 January 2021

Reaction RXN-1126

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7398, coumarins biosynthesis (engineered):
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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