Difference between revisions of "RXN-16294"

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(Created page with "Category:reaction == Reaction FORMYLTHFDEFORMYL-RXN == * direction: ** left-to-right * common-name: ** formyltetrahydrofolate deformylase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction RXN-16294 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/6.3.2.47 ec-6.3.2.47] == Reaction formula == * 1 ATP...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FORMYLTHFDEFORMYL-RXN ==
+
== Reaction RXN-16294 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** formyltetrahydrofolate deformylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.10 ec-3.5.1.10]
+
** [http://enzyme.expasy.org/EC/6.3.2.47 ec-6.3.2.47]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-17545]][c] '''+''' 1 [[VAL]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-17543]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15379]]
+
* Gene: [[SJ11003]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05967]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7909]], formaldehyde oxidation VII (THF pathway):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 
−
** '''6''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115889
+
* METANETX-RXN : MNXR119994
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834]
+
{{#set: ec-number=ec-6.3.2.47}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P37051 P37051]
 
−
** [http://www.uniprot.org/uniprot/Q03432 Q03432]
 
−
** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
 
−
** [http://www.uniprot.org/uniprot/Q46339 Q46339]
 
−
** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=formyltetrahydrofolate deformylase}}
 
−
{{#set: ec-number=ec-3.5.1.10}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-16294

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR119994





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