Difference between revisions of "RXN-16558"

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(Created page with "Category:reaction == Reaction RXN-2542 == * direction: ** left-to-right * common-name: ** 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * direction: ** left-to-right * common-name: ** glutamate-1-semialdehyde aminotransferase * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-2542 ==
+
== Reaction GSAAMINOTRANS-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
+
** glutamate-1-semialdehyde aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.295 ec-2.1.1.295]
+
** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DMPBQ]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01024]]
+
* Gene: [[SJ13978]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10416]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ15772]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-1422]], vitamin E biosynthesis (tocopherols):
+
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR99850
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37980 37980]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18492 P18492]
 +
** [http://www.uniprot.org/uniprot/P21267 P21267]
 +
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
 +
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
 +
** [http://www.uniprot.org/uniprot/P23893 P23893]
 +
** [http://www.uniprot.org/uniprot/O26330 O26330]
 +
** [http://www.uniprot.org/uniprot/P30949 P30949]
 +
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
 +
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
 +
** [http://www.uniprot.org/uniprot/O29027 O29027]
 +
** [http://www.uniprot.org/uniprot/P45621 P45621]
 +
** [http://www.uniprot.org/uniprot/P24630 P24630]
 +
** [http://www.uniprot.org/uniprot/P31593 P31593]
 +
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
 +
** [http://www.uniprot.org/uniprot/P48247 P48247]
 +
** [http://www.uniprot.org/uniprot/P46716 P46716]
 +
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
 +
** [http://www.uniprot.org/uniprot/O74061 O74061]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-methyl-6-phytyl-1,4-benzoquinone methyltransferase}}
+
{{#set: common-name=glutamate-1-semialdehyde aminotransferase}}
−
{{#set: ec-number=ec-2.1.1.295}}
+
{{#set: ec-number=ec-5.4.3.8}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:38, 15 March 2021

Reaction GSAAMINOTRANS-RXN

  • direction:
    • left-to-right
  • common-name:
    • glutamate-1-semialdehyde aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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