Difference between revisions of "RXN-16559"

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(Created page with "Category:reaction == Reaction 3.5.1.88-RXN == * direction: ** left-to-right * common-name: ** peptide deformylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-...")
(Created page with "Category:reaction == Reaction RXN-16559 == * direction: ** reversible * common-name: ** long-chain-3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.or...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.5.1.88-RXN ==
+
== Reaction RXN-16559 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** peptide deformylase
+
** long-chain-3-hydroxyacyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88]
+
** [http://enzyme.expasy.org/EC/1.1.1.211 ec-1.1.1.211]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
+
* 1 [[CPD-17814]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-17815]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ06192]]
+
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
+
* Gene: [[SJ16470]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis:
 +
** '''4''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR109727
+
* METANETX-RXN : MNXR120192
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24421 24421]
+
{{#set: common-name=long-chain-3-hydroxyacyl-coa dehydrogenase}}
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.1.1.211}}
** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
+
{{#set: nb gene associated=2}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=1}}
{{#set: common-name=peptide deformylase}}
+
{{#set: reconstruction category=annotation}}
{{#set: ec-number=ec-3.5.1.88}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-16559

  • direction:
    • reversible
  • common-name:
    • long-chain-3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7656, Spodoptera littoralis pheromone biosynthesis:
    • 4 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR120192