Difference between revisions of "RXN-16623"

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(Created page with "Category:reaction == Reaction MEVALONATE-KINASE-RXN == * direction: ** reversible * common-name: ** mevalonate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.36...")
(Created page with "Category:reaction == Reaction RXN-16623 == * direction: ** left-to-right * common-name: ** (3r,7z)-3-hydroxy-hexadec-7-enoyl-[acp] dehydratase * ec-number: ** [http://enzy...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MEVALONATE-KINASE-RXN ==
+
== Reaction RXN-16623 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** mevalonate kinase
+
** (3r,7z)-3-hydroxy-hexadec-7-enoyl-[acp] dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.36 ec-2.7.1.36]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[MEVALONATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-499]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[3R-7Z-3-hydroxy-hexadec-7-enoyl-ACPs]][c] '''=>''' 1 [[2E-7Z-hexadeca-2-7-dienoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11576]]
+
* Gene: [[SJ10275]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09599]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7391]], isoprene biosynthesis II (engineered):
+
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''13''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-922]], mevalonate pathway I:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6174]], mevalonate pathway II (archaea):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR120243
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17068 17068]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=(3r,7z)-3-hydroxy-hexadec-7-enoyl-[acp] dehydratase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02245 R02245]
+
{{#set: ec-number=ec-4.2.1.59}}
−
* UNIPROT:
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P17256 P17256]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q03426 Q03426]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P07277 P07277]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q58487 Q58487]
 
−
** [http://www.uniprot.org/uniprot/P46086 P46086]
 
−
** [http://www.uniprot.org/uniprot/Q09780 Q09780]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=mevalonate kinase}}
 
−
{{#set: ec-number=ec-2.7.1.36}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-16623

  • direction:
    • left-to-right
  • common-name:
    • (3r,7z)-3-hydroxy-hexadec-7-enoyl-[acp] dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7664, oleate biosynthesis IV (anaerobic):
    • 13 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR120243

Property "Common-name" (as page type) with input value "(3r,7z)-3-hydroxy-hexadec-7-enoyl-[acp] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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