Difference between revisions of "RXN-16632"

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(Created page with "Category:reaction == Reaction RXN-7660 == * direction: ** reversible * common-name: ** tetrahydrogeranylgeranyl diphosphate reductase == Reaction formula == * 1 NADP[c...")
(Created page with "Category:reaction == Reaction RXN-7163 == * direction: ** left-to-right * common-name: ** inositol-1,3,4,5,6-pentakisphosphate 2-kinase * ec-number: ** [http://enzyme.expa...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7660 ==
+
== Reaction RXN-7163 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** tetrahydrogeranylgeranyl diphosphate reductase
+
** inositol-1,3,4,5,6-pentakisphosphate 2-kinase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.158 ec-2.7.1.158]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''<=>''' 1 [[CPD-7003]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-1107]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MI-HEXAKISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15264]]
+
* Gene: [[SJ21412]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22245]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5063]], phytyl diphosphate biosynthesis:
+
* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-4661]], 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza):
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6361]], 1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6369]], inositol diphosphates biosynthesis:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20314 20314]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05202 R05202]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=tetrahydrogeranylgeranyl diphosphate reductase}}
+
{{#set: common-name=inositol-1,3,4,5,6-pentakisphosphate 2-kinase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.7.1.158}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:16, 14 January 2021

Reaction RXN-7163

  • direction:
    • left-to-right
  • common-name:
    • inositol-1,3,4,5,6-pentakisphosphate 2-kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6554, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4661, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6372, 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6361, 1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6369, inositol diphosphates biosynthesis:
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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