Difference between revisions of "RXN-16637"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 3.4.21.53-RXN == * direction: ** left-to-right * common-name: ** serine protease * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.53 ec-3....")
(Created page with "Category:reaction == Reaction RXN-16637 == * direction: ** left-to-right * common-name: ** aminoacyl-trna hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1.29 e...")
 
(6 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.21.53-RXN ==
+
== Reaction RXN-16637 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** serine protease
+
** aminoacyl-trna hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.21.53 ec-3.4.21.53]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* 1 [[Charged-CYS-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYS]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07766]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ09079]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00680]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ08827]]
+
* Gene: [[SJ03879]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04794]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05960]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6308]], L-cysteine biosynthesis II (tRNA-dependent):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR120256
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P36774 P36774]
 
−
** [http://www.uniprot.org/uniprot/P36773 P36773]
 
−
** [http://www.uniprot.org/uniprot/P43864 P43864]
 
−
** [http://www.uniprot.org/uniprot/O66605 O66605]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD92 Q9ZD92]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJL3 Q9ZJL3]
 
−
** [http://www.uniprot.org/uniprot/Q9X1W8 Q9X1W8]
 
−
** [http://www.uniprot.org/uniprot/O83536 O83536]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9F4 Q9Z9F4]
 
−
** [http://www.uniprot.org/uniprot/P55995 P55995]
 
−
** [http://www.uniprot.org/uniprot/O84348 O84348]
 
−
** [http://www.uniprot.org/uniprot/P47481 P47481]
 
−
** [http://www.uniprot.org/uniprot/O51558 O51558]
 
−
** [http://www.uniprot.org/uniprot/O69300 O69300]
 
−
** [http://www.uniprot.org/uniprot/Q59185 Q59185]
 
−
** [http://www.uniprot.org/uniprot/Q9JUC0 Q9JUC0]
 
−
** [http://www.uniprot.org/uniprot/P37945 P37945]
 
−
** [http://www.uniprot.org/uniprot/P77810 P77810]
 
−
** [http://www.uniprot.org/uniprot/P46067 P46067]
 
−
** [http://www.uniprot.org/uniprot/P78025 P78025]
 
−
** [http://www.uniprot.org/uniprot/Q59511 Q59511]
 
−
** [http://www.uniprot.org/uniprot/P0A9M0 P0A9M0]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=serine protease}}
+
{{#set: common-name=aminoacyl-trna hydrolase}}
−
{{#set: ec-number=ec-3.4.21.53}}
+
{{#set: ec-number=ec-3.1.1.29}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-16637

  • direction:
    • left-to-right
  • common-name:
    • aminoacyl-trna hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6308, L-cysteine biosynthesis II (tRNA-dependent):
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR120256





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-16637&oldid=142704"