Difference between revisions of "RXN-16637"

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(Created page with "Category:reaction == Reaction BETAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** β-galactosidase ** beta-galactosidase ** lactose galactohydrolase...")
(Created page with "Category:reaction == Reaction TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37. == * direction: ** left-to-right == Reaction formula == * 1.0 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction BETAGALACTOSID-RXN ==
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== Reaction TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** β-galactosidase
 
−
** beta-galactosidase
 
−
** lactose galactohydrolase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.2.1.108 ec-3.2.1.108]
 
−
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15972]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GALACTOSE]][c] '''+''' 1 [[Glucopyranose]][c]
+
* 1.0 [[CPD-14282]][c] '''+''' 1.0 [[NADH]][c] '''+''' 1.0 [[PROTON]][c] '''=>''' 1.0 [[CPD-10280]][c] '''+''' 1.0 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14193]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10277]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ04558]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03139]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[BGALACT-PWY]], lactose degradation III:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q29522 Q29522]
 
−
** [http://www.uniprot.org/uniprot/Q29521 Q29521]
 
−
** [http://www.uniprot.org/uniprot/Q29519 Q29519]
 
−
** [http://www.uniprot.org/uniprot/Q29518 Q29518]
 
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** [http://www.uniprot.org/uniprot/P09849 P09849]
 
−
** [http://www.uniprot.org/uniprot/P09848 P09848]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01100 R01100]
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10076 10076]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=β-galactosidase|lactose galactohydrolase|beta-galactosidase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-3.2.1.108|ec-3.2.1.23}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=4}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 13:19, 14 January 2021

Reaction TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-16637&oldid=90603"