Difference between revisions of "RXN-16653"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] == * direction: ** left-to-right * synonymous: ** crtz == Reaction formula == *...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12752 RXN-12752] == * direction: ** left-to-right * common-name: ** nadhx epimerase * ec-number...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12752 RXN-12752] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
+
* common-name:
−
** crtz
+
** nadhx epimerase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/5.1.99.6 ec-5.1.99.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7409]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD0-2472]][c] '''=>''' 1 [[CPD-653]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07227]]
+
* Gene: [[SJ03655]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07228]]
+
* Gene: [[SJ18665]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18666]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
+
* [[PWY-6938]], NADH repair: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6938 PWY-6938]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32216 32216]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=crtz}}
+
{{#set: common-name=nadhx epimerase}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-5.1.99.6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=unknown-tool}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=sjap}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:28, 26 August 2019

Reaction RXN-12752

  • direction:
    • left-to-right
  • common-name:
    • nadhx epimerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6938, NADH repair: PWY-6938
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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