Difference between revisions of "RXN-16889"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] == * direction: ** left-to-right * common-name: ** 1-alkyl-sn-glycero-3-phosph...")
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7182 PWY-7182] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-27...")
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[[Category:reaction]]
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[[Category:pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7182 PWY-7182] ==
* direction:
+
* taxonomic-range:
** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
 
* common-name:
 
* common-name:
** 1-alkyl-sn-glycero-3-phosphate acyltransferase
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** linalool biosynthesis i
** 1-acylglycerol-3-phosphate o-acyltransferase
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== Reaction(s) found ==
* ec-number:
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* [[GPPSYN-RXN]]
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
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== Reaction(s) not found ==
== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.26-RXN 4.2.3.26-RXN]
* 1 [[1-Alkyl-glycerol-3-phosphate]][c] '''+''' 1 [[ACYL-COA]][c] '''=>''' 1 [[1-Alkyl-2-acyl-glycerol-3-phosphate]][c] '''+''' 1 [[CO-A]][c]
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{{#set: taxonomic-range=tax-2759}}
== Gene(s) associated with this reaction  ==
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{{#set: common-name=linalool biosynthesis i}}
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb reaction found=1}}
* Gene: [[SJ13501]]
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{{#set: completion rate=0.5}}
** Category: [[annotation]]
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{{#set: nb total reaction=2}}
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13801]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ20565]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15136]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18009]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ01857]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ09888]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ10647]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ08831]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13643]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
== Pathway(s) ==
 
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
 
** '''11''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=1-acylglycerol-3-phosphate o-acyltransferase|1-alkyl-sn-glycero-3-phosphate acyltransferase}}
 
{{#set: ec-number=ec-2.3.1.51}}
 
{{#set: nb gene associated=10}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:32, 27 August 2019

Pathway PWY-7182

  • taxonomic-range:
  • common-name:
    • linalool biosynthesis i

Reaction(s) found

Reaction(s) not found