Difference between revisions of "RXN-16892"

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(Created page with "Category:reaction == Reaction NITRATE-REDUCTASE-NADPH-RXN == * direction: ** left-to-right * common-name: ** nitrate reductase ** nitrate reductase (nadph) * ec-number: **...")
(Created page with "Category:reaction == Reaction PSERTRANSAMPYR-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52] == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NITRATE-REDUCTASE-NADPH-RXN ==
+
== Reaction PSERTRANSAMPYR-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** nitrate reductase
 
−
** nitrate reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.1.3 ec-1.7.1.3]
+
** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00644]]
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* Gene: [[SJ02143]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ15446]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5675]], nitrate reduction V (assimilatory):
+
* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19063 19063]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16576 16576]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00796 R00796]
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
−
* UNIPROT:
+
{{#set: direction=reversible}}
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** [http://www.uniprot.org/uniprot/Q12561 Q12561]
+
{{#set: ec-number=ec-2.6.1.52}}
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** [http://www.uniprot.org/uniprot/P22945 P22945]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P39863 P39863]
 
−
** [http://www.uniprot.org/uniprot/Q05531 Q05531]
 
−
** [http://www.uniprot.org/uniprot/P36858 P36858]
 
−
** [http://www.uniprot.org/uniprot/P36842 P36842]
 
−
** [http://www.uniprot.org/uniprot/P39864 P39864]
 
−
** [http://www.uniprot.org/uniprot/Q01696 Q01696]
 
−
** [http://www.uniprot.org/uniprot/Q00284 Q00284]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=nitrate reductase|nitrate reductase (nadph)}}
 
−
{{#set: ec-number=ec-1.7.1.3}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:07, 5 January 2021

Reaction PSERTRANSAMPYR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I:
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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