Difference between revisions of "RXN-16910"

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(Created page with "Category:reaction == Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN == * direction: ** left-to-right * common-name: ** n-carbamoylputrescine amidohydrolase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN-16112 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN ==
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== Reaction RXN-16112 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** n-carbamoylputrescine amidohydrolase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.5.1.53 ec-3.5.1.53]
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** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-597]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
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* 1 [[CPD-17324]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-17367]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ06121]]
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* Gene: [[SJ06969]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-43]], putrescine biosynthesis II:
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* [[PWY-7728]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase):
** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''2''' reactions found over '''5''' reactions in the full pathway
* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway):
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''8''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22285 22285]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=n-carbamoylputrescine amidohydrolase}}
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{{#set: ec-number=ec-1.1.1.330}}
{{#set: ec-number=ec-3.5.1.53}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction RXN-16112

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7728, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase):
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
    • 8 reactions found over 13 reactions in the full pathway

Reconstruction information

External links