Difference between revisions of "RXN-16991"

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(Created page with "Category:reaction == Reaction RXN-14277 == * direction: ** reversible * common-name: ** hexanoyl-coa c-acyltransferase ** acetyl-coa c-acyltransferase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction RXN0-2142 == * direction: ** left-to-right * common-name: ** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14277 ==
+
== Reaction RXN0-2142 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** hexanoyl-coa c-acyltransferase
+
** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase
−
** acetyl-coa c-acyltransferase
+
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-COA]][c] '''+''' 1 [[HEXANOYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD0-2106]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14898]]
+
* Gene: [[SJ04229]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ16470]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21817]]
+
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ21818]]
+
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ09371]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7858]], (5Z)-dodecenoate biosynthesis II:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31205 31205]
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|3-oxo-cis-&delta;5-dodecenoyl-[acp] reductase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.1.1.100}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04747 R04747]
+
{{#set: nb gene associated=3}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=2}}
−
{{#set: common-name=hexanoyl-coa c-acyltransferase|acetyl-coa c-acyltransferase}}
 
−
{{#set: ec-number=ec-2.3.1.16}}
 
−
{{#set: nb gene associated=5}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:07, 14 January 2021

Reaction RXN0-2142

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-cis-δ5-dodecenoyl-[acp] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-862, (5Z)-dodecenoate biosynthesis I:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7858, (5Z)-dodecenoate biosynthesis II:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-cis-δ5-dodecenoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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