Difference between revisions of "RXN-16991"

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(Created page with "Category:reaction == Reaction PROTOPORGENOXI-RXN == * direction: ** left-to-right * common-name: ** protoporphyrinogen oxidase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction GLU6PDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** glucose-6-phosphate dehydrogenase (nadp+) * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROTOPORGENOXI-RXN ==
+
== Reaction GLU6PDEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** protoporphyrinogen oxidase
+
** glucose-6-phosphate dehydrogenase (nadp+)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.3.4 ec-1.3.3.4]
+
** [http://enzyme.expasy.org/EC/1.1.1.49 ec-1.1.1.49]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''=>''' 3 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
+
* 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21798]]
+
* Gene: [[SJ11913]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
+
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
+
* [[P122-PWY]], heterolactic fermentation:
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''16''' reactions found over '''18''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
+
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''2''' reactions in the full pathway
−
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
+
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[RUMP-PWY]], formaldehyde oxidation I:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25577 25577]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15842 15842]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03222 R03222]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P50336 P50336]
+
** [http://www.uniprot.org/uniprot/P11411 P11411]
−
** [http://www.uniprot.org/uniprot/Q49404 Q49404]
+
** [http://www.uniprot.org/uniprot/P12646 P12646]
−
** [http://www.uniprot.org/uniprot/Q9CHX0 Q9CHX0]
+
** [http://www.uniprot.org/uniprot/Q00612 Q00612]
−
** [http://www.uniprot.org/uniprot/P0ACB4 P0ACB4]
+
** [http://www.uniprot.org/uniprot/P54996 P54996]
−
** [http://www.uniprot.org/uniprot/Q7M1R6 Q7M1R6]
+
** [http://www.uniprot.org/uniprot/P21907 P21907]
−
** [http://www.uniprot.org/uniprot/P51175 P51175]
+
** [http://www.uniprot.org/uniprot/P54547 P54547]
−
** [http://www.uniprot.org/uniprot/O24163 O24163]
+
** [http://www.uniprot.org/uniprot/O51581 O51581]
−
** [http://www.uniprot.org/uniprot/O24164 O24164]
+
** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
−
** [http://www.uniprot.org/uniprot/O64384 O64384]
+
** [http://www.uniprot.org/uniprot/P11413 P11413]
−
** [http://www.uniprot.org/uniprot/O64385 O64385]
+
** [http://www.uniprot.org/uniprot/P29686 P29686]
 +
** [http://www.uniprot.org/uniprot/P44311 P44311]
 +
** [http://www.uniprot.org/uniprot/P56110 P56110]
 +
** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
 +
** [http://www.uniprot.org/uniprot/O25730 O25730]
 +
** [http://www.uniprot.org/uniprot/O51240 O51240]
 +
** [http://www.uniprot.org/uniprot/O66787 O66787]
 +
** [http://www.uniprot.org/uniprot/P05370 P05370]
 +
** [http://www.uniprot.org/uniprot/P11410 P11410]
 +
** [http://www.uniprot.org/uniprot/P11412 P11412]
 +
** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
 +
** [http://www.uniprot.org/uniprot/P48828 P48828]
 +
** [http://www.uniprot.org/uniprot/P37986 P37986]
 +
** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
 +
** [http://www.uniprot.org/uniprot/Q27741 Q27741]
 +
** [http://www.uniprot.org/uniprot/P48826 P48826]
 +
** [http://www.uniprot.org/uniprot/Q42919 Q42919]
 +
** [http://www.uniprot.org/uniprot/P37830 P37830]
 +
** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
 +
** [http://www.uniprot.org/uniprot/Q49700 Q49700]
 +
** [http://www.uniprot.org/uniprot/P73411 P73411]
 +
** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
 +
** [http://www.uniprot.org/uniprot/Q43793 Q43793]
 +
** [http://www.uniprot.org/uniprot/O65856 O65856]
 +
** [http://www.uniprot.org/uniprot/Q43839 Q43839]
 +
** [http://www.uniprot.org/uniprot/O81978 O81978]
 +
** [http://www.uniprot.org/uniprot/O24357 O24357]
 +
** [http://www.uniprot.org/uniprot/O24358 O24358]
 +
** [http://www.uniprot.org/uniprot/O24359 O24359]
 +
** [http://www.uniprot.org/uniprot/O22404 O22404]
 +
** [http://www.uniprot.org/uniprot/O22405 O22405]
 +
** [http://www.uniprot.org/uniprot/O22406 O22406]
 +
** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
 +
** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=protoporphyrinogen oxidase}}
+
{{#set: common-name=glucose-6-phosphate dehydrogenase (nadp+)}}
−
{{#set: ec-number=ec-1.3.3.4}}
+
{{#set: ec-number=ec-1.1.1.49}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:08, 5 January 2021

Reaction GLU6PDEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • glucose-6-phosphate dehydrogenase (nadp+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7268, NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
    • 4 reactions found over 5 reactions in the full pathway
  • P122-PWY, heterolactic fermentation:
    • 16 reactions found over 18 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and the Entner-Doudoroff pathway:
    • 4 reactions found over 2 reactions in the full pathway
  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I:
    • 3 reactions found over 3 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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