Difference between revisions of "RXN-16993"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-882 RXN0-882] == * direction: ** left-to-right * common-name: ** 4-hydroxy-3-methylbut-2-en-1-...")
(Created page with "Category:reaction == Reaction RXN-16993 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.14.19.36 ec-1.14.19.36] == Reaction formula == * 1 1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-882 RXN0-882] ==
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== Reaction RXN-16993 ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/1.17.7.1 ec-1.17.7.1]
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** [http://enzyme.expasy.org/EC/1.14.19.36 ec-1.14.19.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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* 1 [[1-gamma-linolenoyl-2-acyl-glycerolipids]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''<=>''' 1 [[1-stearidonoyl-2-acyl-glycerolipids]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ05642]]
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* Gene: [[SJ09228]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03069]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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* METANETX-RXN : MNXR120563
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26121 26121]
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{{#set: direction=reversible}}
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* LIGAND-RXN:
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{{#set: ec-number=ec-1.14.19.36}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08689 R08689]
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{{#set: nb gene associated=2}}
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{{#set: direction=left-to-right}}
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{{#set: nb pathway associated=0}}
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{{#set: common-name=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase}}
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{{#set: reconstruction category=annotation}}
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{{#set: ec-number=ec-1.17.7.1}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-16993

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR120563





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