Difference between revisions of "RXN-17010"

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(Created page with "Category:reaction == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** sedoheptulose bisphosphatase ** sedoheptulose-bisphosphat...")
(Created page with "Category:reaction == Reaction FERRIC-CHELATE-REDUCTASE-RXN == * direction: ** left-to-right * common-name: ** ferric-chelate reductase (nadh) ** ferric-chelate reductase *...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN ==
+
== Reaction FERRIC-CHELATE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** sedoheptulose bisphosphatase
+
** ferric-chelate reductase (nadh)
−
** sedoheptulose-bisphosphatase
+
** ferric-chelate reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3.1.3.37]
+
** [http://enzyme.expasy.org/EC/1.16.1.7 ec-1.16.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[Pi]][c]
+
* 2 [[Fe3-siderophores]][c] '''+''' 1 [[NADH]][c] '''=>''' 2 [[Fe2-siderophores]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10463]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ07591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22411]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22407]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22408]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08829]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ17320]]
+
* Gene: [[SJ22414]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15628]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02902]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01976]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
</div>
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16950]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
+
* [[PWY-6854]], ethylene biosynthesis III (microbes):
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5934]], iron reduction and absorption:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17462 17462]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15063 15063]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00092 R00092]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23014 P23014]
 
−
** [http://www.uniprot.org/uniprot/P46285 P46285]
 
−
** [http://www.uniprot.org/uniprot/P46283 P46283]
 
−
** [http://www.uniprot.org/uniprot/P46284 P46284]
 
−
** [http://www.uniprot.org/uniprot/O23780 O23780]
 
−
** [http://www.uniprot.org/uniprot/O20252 O20252]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=sedoheptulose bisphosphatase|sedoheptulose-bisphosphatase}}
+
{{#set: common-name=ferric-chelate reductase|ferric-chelate reductase (nadh)}}
−
{{#set: ec-number=ec-3.1.3.37}}
+
{{#set: ec-number=ec-1.16.1.7}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=9}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction FERRIC-CHELATE-REDUCTASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • ferric-chelate reductase (nadh)
    • ferric-chelate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6854, ethylene biosynthesis III (microbes):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5934, iron reduction and absorption:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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