Difference between revisions of "RXN-17013"

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(Created page with "Category:reaction == Reaction RXN-1882 == * direction: ** reversible * common-name: ** gdp-d-mannose 3'',5''-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.1...")
(Created page with "Category:reaction == Reaction NQOR-RXN == * direction: ** left-to-right * common-name: ** nad(p)h:quinone oxidoreductase ** nad(p)h dehydrogenase (quinone) * ec-number: **...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1882 ==
+
== Reaction NQOR-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** gdp-d-mannose 3'',5''-epimerase
+
** nad(p)h:quinone oxidoreductase
 +
** nad(p)h dehydrogenase (quinone)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.1.3.18 ec-5.1.3.18]
+
** [http://enzyme.expasy.org/EC/1.6.5.2 ec-1.6.5.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-MANNOSE]][c] '''<=>''' 1 [[GDP-L-GALACTOSE]][c]
+
* 1 [[ETR-Quinones]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02713]]
+
* Gene: [[SJ17755]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ18408]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5115]], GDP-L-galactose biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY4FS-13]], extended VTC2 cycle:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY4FS-12]], VTC2 cycle:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway):
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11147 11147]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11357 11357]
−
* LIGAND-RXN:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00889 R00889]
+
** [http://www.uniprot.org/uniprot/P15559 P15559]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P16083 P16083]
−
{{#set: common-name=gdp-d-mannose 3'',5''-epimerase}}
+
** [http://www.uniprot.org/uniprot/P05982 P05982]
−
{{#set: ec-number=ec-5.1.3.18}}
+
** [http://www.uniprot.org/uniprot/Q64669 Q64669]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P0A756 P0A756]
−
{{#set: nb pathway associated=4}}
+
** [http://www.uniprot.org/uniprot/P43340 P43340]
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P0A754 P0A754]
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
** [http://www.uniprot.org/uniprot/P45245 P45245]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=nad(p)h dehydrogenase (quinone)|nad(p)h:quinone oxidoreductase}}
 +
{{#set: ec-number=ec-1.6.5.2}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction NQOR-RXN

  • direction:
    • left-to-right
  • common-name:
    • nad(p)h:quinone oxidoreductase
    • nad(p)h dehydrogenase (quinone)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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